gnu: r-hpar: Avoid internet access.

ExperimentHub::createHubAccessors needs internet access.  When R tests if the
package can be loaded it runs zzz.R, which contains the call to
createHubAccessors.  We set the variable GUIX_BUILD to conditionally disable
this call.

* gnu/packages/bioconductor.scm (r-hpar)[arguments]: Add two build phases:
'set-HOME and 'avoid-internet-access.
This commit is contained in:
Ricardo Wurmus 2023-04-29 15:23:55 +02:00
parent 9a2908211c
commit 46d78bf045
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@ -7128,6 +7128,20 @@ (define-public r-hpar
(base32
"1sg0mjada72a13xh3k6xsiaff7xj4mp76r6i8iab8nfkvng07p4i"))))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'set-HOME
(lambda _
(setenv "HOME" "/tmp")))
(add-after 'unpack 'avoid-internet-access
(lambda _
(setenv "GUIX_BUILD" "yes")
(substitute* "R/zzz.R"
(("ExperimentHub::createHubAccessors.*" m)
(string-append
"if (Sys.getenv(\"GUIX_BUILD\") == \"\") {" m "}"))))))))
(propagated-inputs (list r-experimenthub))
(native-inputs
(list r-knitr))