gnu: Add r-projectils.
* gnu/packages/bioinformatics.scm (r-projectils): New variable. Change-Id: Ia975cfcb9c79e59b029c6839dc87b5dcb89bf72a
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@ -10349,6 +10349,51 @@ (define-public r-premessa
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bead-based normalization and debarcoding.")
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bead-based normalization and debarcoding.")
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(license license:gpl3))))
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(license license:gpl3))))
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(define-public r-projectils
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(let ((commit "cc73b97471b4b6eea11ce779b5c4a7dc5c3e1709")
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(revision "1"))
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(package
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(name "r-projectils")
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(version (git-version "3.0.0" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/carmonalab/ProjecTILs")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0dpzvbhhb9andnj7angpj32cgkwd6rs6qgpl6i21pqzcn6vqqhqw"))))
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(properties `((upstream-name . "ProjecTILs")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-biocneighbors
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r-biocparallel
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r-dplyr
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r-ggplot2
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r-matrix
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r-patchwork
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r-pheatmap
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r-pracma
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r-purrr
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r-rcolorbrewer
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r-reshape2
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r-scales
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r-scgate
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r-seurat
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r-seuratobject
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r-stacas
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r-ucell
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r-umap
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r-uwot))
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(home-page "https://github.com/carmonalab/ProjecTILs")
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(synopsis "Reference-based analysis of scRNA-seq data")
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(description
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"This package implements methods to project single-cell RNA-seq data
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onto a reference atlas, enabling interpretation of unknown cell transcriptomic
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states in the the context of known, reference states.")
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(license license:gpl3))))
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(define-public r-presto
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(define-public r-presto
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(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
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(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
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(revision "0"))
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(revision "0"))
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