gnu: Add r-projectils.

* gnu/packages/bioinformatics.scm (r-projectils): New variable.

Change-Id: Ia975cfcb9c79e59b029c6839dc87b5dcb89bf72a
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Mădălin Ionel Patrașcu 2023-12-27 11:02:36 +01:00 committed by Ricardo Wurmus
parent c8e2b85ed1
commit 404c4a5aba
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@ -10349,6 +10349,51 @@ (define-public r-premessa
bead-based normalization and debarcoding.") bead-based normalization and debarcoding.")
(license license:gpl3)))) (license license:gpl3))))
(define-public r-projectils
(let ((commit "cc73b97471b4b6eea11ce779b5c4a7dc5c3e1709")
(revision "1"))
(package
(name "r-projectils")
(version (git-version "3.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/carmonalab/ProjecTILs")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0dpzvbhhb9andnj7angpj32cgkwd6rs6qgpl6i21pqzcn6vqqhqw"))))
(properties `((upstream-name . "ProjecTILs")))
(build-system r-build-system)
(propagated-inputs
(list r-biocneighbors
r-biocparallel
r-dplyr
r-ggplot2
r-matrix
r-patchwork
r-pheatmap
r-pracma
r-purrr
r-rcolorbrewer
r-reshape2
r-scales
r-scgate
r-seurat
r-seuratobject
r-stacas
r-ucell
r-umap
r-uwot))
(home-page "https://github.com/carmonalab/ProjecTILs")
(synopsis "Reference-based analysis of scRNA-seq data")
(description
"This package implements methods to project single-cell RNA-seq data
onto a reference atlas, enabling interpretation of unknown cell transcriptomic
states in the the context of known, reference states.")
(license license:gpl3))))
(define-public r-presto (define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad") (let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0")) (revision "0"))