gnu: Add r-alpsnmr.

* gnu/packages/bioconductor.scm (r-alpsnmr): New variable.
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Mădălin Ionel Patrașcu 2023-01-17 13:25:38 +01:00 committed by Ricardo Wurmus
parent b374a45eb0
commit 3d9516344e
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@ -2619,6 +2619,59 @@ (define-public r-alpine
data.")
(license license:gpl2+)))
(define-public r-alpsnmr
(package
(name "r-alpsnmr")
(version "4.0.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AlpsNMR" version))
(sha256
(base32
"1y4qqc6l8flv5ns4qwzjwmcykm6zcm4jg097mn8xyp7mnxymy7pl"))))
(properties `((upstream-name . "AlpsNMR")))
(build-system r-build-system)
(propagated-inputs
(list r-baseline
r-biocparallel
r-dplyr
r-fs
r-future
r-generics
r-ggplot2
r-glue
r-htmltools
r-magrittr
r-matrixstats
r-mixomics
r-pcapp
r-purrr
r-readxl
r-reshape2
r-rlang
r-rmarkdown
r-scales
r-signal
r-speaq
r-stringr
r-tibble
r-tidyr
r-tidyselect
r-vctrs))
(native-inputs (list r-knitr))
(home-page "https://sipss.github.io/AlpsNMR/")
(synopsis "Automated spectral processing system for NMR")
(description
"This package reads Bruker @acronym{NMR, Nuclear Magnetic Resonance} data
directories both zipped and unzipped. It provides automated and efficient
signal processing for untargeted NMR metabolomics. It is able to interpolate
the samples, detect outliers, exclude regions, normalize, detect peaks, align
the spectra, integrate peaks, manage metadata and visualize the spectra.
After spectra processing, it can apply multivariate analysis on extracted
data. Efficient plotting with 1-D data is also available. Basic reading of
1D ACD/Labs exported JDX samples is also available.")
(license license:expat)))
(define-public r-altcdfenvs
(package
(name "r-altcdfenvs")