From 391fc11f0e492b06fa6eb31535e1e34165040b7d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 20 Sep 2018 15:53:20 +0200 Subject: [PATCH] gnu: python2-scikit-learn: Fix check phase. * gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]: Override check phase to disable broken tests and pass environment variables. --- gnu/packages/machine-learning.scm | 19 ++++++++++++++++++- 1 file changed, 18 insertions(+), 1 deletion(-) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 9aa61bd8f8..990a6c771a 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -750,7 +750,24 @@ (define-public python-scikit-learn (license license:bsd-3))) (define-public python2-scikit-learn - (package-with-python2 python-scikit-learn)) + (let ((parent (package-with-python2 python-scikit-learn))) + (package (inherit parent) + (arguments + (substitute-keyword-arguments (package-arguments parent) + ((#:phases phases) + `(modify-phases ,phases + (replace 'check + (lambda _ + ;; Restrict OpenBLAS threads to prevent segfaults while testing! + (setenv "OPENBLAS_NUM_THREADS" "1") + ;; Some tests expect to be able to write to HOME. + (setenv "HOME" "/tmp") + ;; Disable tests that require network access + (delete-file "sklearn/datasets/tests/test_kddcup99.py") + (delete-file "sklearn/datasets/tests/test_mldata.py") + (delete-file "sklearn/datasets/tests/test_rcv1.py") + (invoke "pytest" "sklearn") + #t))))))))) (define-public python-autograd (let* ((commit "442205dfefe407beffb33550846434baa90c4de7")