gnu: Add r-bioqc.

* gnu/packages/bioconductor.scm (r-bioqc): New variable.
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Ricardo Wurmus 2021-09-07 14:38:43 +02:00
parent d5f792ac10
commit 32d8a7d3ba
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@ -14408,6 +14408,34 @@ (define-public r-bionetstat
network and metabolic pathways view.")
(license license:gpl3+)))
(define-public r-bioqc
(package
(name "r-bioqc")
(version "1.20.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BioQC" version))
(sha256
(base32
"04akp94p0d0zid55m1b1k3qlw7iq914pcg57lihgj3pa92n1sc5l"))))
(properties `((upstream-name . "BioQC")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-edger" ,r-edger)
("r-rcpp" ,r-rcpp)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://accio.github.io/BioQC/")
(synopsis "Detect tissue heterogeneity in expression profiles with gene sets")
(description
"BioQC performs quality control of high-throughput expression data based
on tissue gene signatures. It can detect tissue heterogeneity in gene
expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is
optimised for high performance.")
(license license:gpl3+)))
(define-public r-tximeta
(package
(name "r-tximeta")