gnu: python2-bx-python: Update to 0.8.2.
* gnu/packages/bioinformatics.scm (python2-bx-python): Update to 0.8.2. [source]: Remove obsolete snippet. [inputs]: Move python2-numpy from here... [propagated-inputs]: ...to here; add python2-six. [native-inputs]: Add python2-lzo and python2-cython. [home-page]: Update to new home at Github.
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@ -1477,31 +1477,27 @@ (define-public bwa-pssm
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(define-public python2-bx-python
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(package
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(name "python2-bx-python")
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(version "0.7.3")
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(version "0.8.2")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "bx-python" version))
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(sha256
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(base32
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"15z2w3bvnc0n4qmb9bd6d8ylc2h2nj883x2w9iixf4x3vki9b22i"))
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(modules '((guix build utils)))
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(snippet
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'(begin
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(substitute* "setup.py"
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;; remove dependency on outdated "distribute" module
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(("^from distribute_setup import use_setuptools") "")
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(("^use_setuptools\\(\\)") ""))
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#t))))
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"11kksg2rbzihpmcid823xvg42xi88m7sz58rzk29abybkxy0rszs"))))
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(build-system python-build-system)
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(arguments
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`(#:tests? #f ;tests fail because test data are not included
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#:python ,python-2))
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(inputs
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(propagated-inputs
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`(("python-numpy" ,python2-numpy)
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("zlib" ,zlib)))
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("python-six" ,python2-six)))
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(inputs
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`(("zlib" ,zlib)))
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(native-inputs
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`(("python-nose" ,python2-nose)))
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(home-page "http://bitbucket.org/james_taylor/bx-python/")
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`(("python-lzo" ,python2-lzo)
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("python-nose" ,python2-nose)
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("python-cython" ,python2-cython)))
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(home-page "https://github.com/bxlab/bx-python")
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(synopsis "Tools for manipulating biological data")
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(description
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"bx-python provides tools for manipulating biological data, particularly
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