gnu: Add r-bamutils.

* gnu/packages/bioinformatics.scm (r-bamutils): New variable.
This commit is contained in:
Ricardo Wurmus 2022-09-21 10:54:32 +02:00
parent 4bd64dde2b
commit 29634a4ce3
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@ -7306,6 +7306,38 @@ (define-public r-gutils
@code{GenomicRanges} operations.")
(license license:gpl2))))
(define-public r-bamutils
(let ((commit "639dba901f16944fa1b7a8d7048701ba86a2cdb8")
(revision "1"))
(package
(name "r-bamutils")
(version (git-version "0.0.0.9000" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mskilab/bamutils/")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0qwby2v5rydnipvf1iv1wz9nf02yq98k0xbc4inf9mqc54jwacs0"))))
(properties `((upstream-name . "bamUtils")))
(build-system r-build-system)
(propagated-inputs
(list r-abind
r-biocgenerics
r-data-table
r-genomicalignments
r-genomicranges
r-gutils
r-rsamtools
r-variantannotation))
(home-page "https://github.com/mskilab/bamutils/")
(synopsis "Utility functions for manipulating BAMs")
(description "This package provides utility functions for manipulating
BAM files.")
(license license:gpl2))))
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))