From 262ee8eae27d14b1469b41d07c6a2cbfc7f4905d Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
Date: Fri, 6 Apr 2018 17:06:52 +0200
Subject: [PATCH] gnu: htslib-for-sambamba: Fix build.

* gnu/packages/bioinformatics.scm (htslib-for-sambamba)[arguments]: Do not
inherit htslib arguments.
---
 gnu/packages/bioinformatics.scm | 10 ++++------
 1 file changed, 4 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 66d5bd3707..88aa48cd9e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10987,12 +10987,10 @@ (define htslib-for-sambamba
           (base32
            "0g38g8s3npr0gjm9fahlbhiskyfws9l5i0x1ml3rakzj7az5l9c9"))))
       (arguments
-       (substitute-keyword-arguments (package-arguments htslib)
-         ((#:phases phases)
-          `(modify-phases  ,phases
-             (add-after 'unpack 'bootstrap
-               (lambda _
-                 (zero? (system* "autoreconf" "-vif"))))))))
+       `(#:phases
+         (modify-phases  %standard-phases
+           (add-after 'unpack 'bootstrap
+             (lambda _ (invoke "autoreconf" "-vif"))))))
       (native-inputs
        `(("autoconf" ,autoconf)
          ("automake" ,automake)