gnu: Add r-loomr.
* gnu/packages/bioinformatics.scm (r-loomr): New variable.
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@ -7808,6 +7808,32 @@ (define-public r-limma
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different technologies, including microarrays, RNA-seq, and quantitative PCR.")
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different technologies, including microarrays, RNA-seq, and quantitative PCR.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-loomr
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(package
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(name "r-loomr")
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(version "0.2.0-beta")
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(source (origin
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(method url-fetch)
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(uri (string-append
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"https://github.com/mojaveazure/loomR/archive/"
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version ".tar.gz"))
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(sha256
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(base32
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"1grchjgiky5siifkl9hmj6v0sf7q2by62rfdj2k8s2zhmrpgb0yw"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-hdf5r" ,r-hdf5r)
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("r-r6" ,r-r6)
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("r-iterators" ,r-iterators)
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("r-itertools" ,r-itertools)
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("r-matrix" ,r-matrix)))
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(home-page "http://loompy.org")
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(synopsis "R interface for loom files")
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(description "This package provides an interface for the single-cell
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RNAseq-oriented loom format. Loom files are an HDF5-based format for storing
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and interacting with large single-cell RNAseq datasets.")
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(license license:gpl3)))
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(define-public r-xvector
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(define-public r-xvector
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(package
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(package
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(name "r-xvector")
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(name "r-xvector")
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