gnu: Add r-mia.

* gnu/packages/bioconductor.scm (r-mia): New variable.
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Ricardo Wurmus 2022-11-24 17:59:52 +01:00
parent 90d8ac279f
commit 139da51753
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@ -10027,6 +10027,54 @@ (define-public r-bumphunter
studies.")
(license license:artistic2.0)))
(define-public r-mia
(package
(name "r-mia")
(version "1.6.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "mia" version))
(sha256
(base32
"0yz88ggv6d5rccdwzixwg9y1bc4xysazlmv1ph88wxs8r6fcmync"))))
(properties `((upstream-name . "mia")))
(build-system r-build-system)
(propagated-inputs
(list r-ape
r-biocgenerics
r-biocparallel
r-biostrings
r-decipher
r-decontam
r-delayedarray
r-delayedmatrixstats
r-dirichletmultinomial
r-dplyr
r-iranges
r-mass
r-multiassayexperiment
r-rlang
r-s4vectors
r-scater
r-scuttle
r-singlecellexperiment
r-summarizedexperiment
r-tibble
r-tidyr
r-treesummarizedexperiment
r-vegan))
(native-inputs (list r-knitr))
(home-page "https://github.com/microbiome/mia")
(synopsis "Microbiome analysis")
(description
"The mia package implements tools for microbiome analysis based on the
@code{SummarizedExperiment}, @code{SingleCellExperiment} and
@code{TreeSummarizedExperiment} infrastructure. Data wrangling and analysis
in the context of taxonomic data is the main scope. Additional functions for
common task are implemented such as community indices calculation and
summarization.")
(license license:artistic2.0)))
(define-public r-microbiome
(package
(name "r-microbiome")